Here is an interesting way to think about it.
If you cloned someone like Hitler and raised him in a modern day family, fed him a diet of high fructose corn syrup products and he had different inputs from society, family and environment. Genetically he would be the same but he may think, act and have a different personality all together. He'd probably be a lot fatter, with health issues and have no signature mustache, hell he might even be gay.
all the things you mentioned would be to do with the clones brain. so not really applicable to plants